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PDBsum entry 4u09
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Pore analysis for: 4u09 calculated with  MOLE 2.0
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PDB id
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4u09
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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8 pores,
coloured by radius |
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8 pores,
coloured by radius
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8 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.86 |
1.92 |
40.9 |
-2.53 |
-0.75 |
27.8 |
85 |
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9 |
4 |
8 |
0 |
0 |
1 |
0 |
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2 |
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1.61 |
3.06 |
68.2 |
-2.48 |
-0.46 |
24.1 |
87 |
8 |
8 |
16 |
1 |
4 |
0 |
0 |
MSE 231 B ZN 502 B
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3 |
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1.29 |
2.21 |
73.1 |
-2.06 |
-0.55 |
23.6 |
90 |
9 |
9 |
17 |
2 |
1 |
0 |
0 |
ZN 501 B
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4 |
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1.27 |
2.19 |
73.9 |
-2.17 |
-0.49 |
22.6 |
91 |
10 |
8 |
18 |
3 |
1 |
0 |
0 |
MSE 231 A
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5 |
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1.46 |
1.60 |
76.8 |
-2.43 |
-0.54 |
24.2 |
85 |
8 |
11 |
15 |
2 |
4 |
0 |
0 |
MSE 231 A ZN 501 B ZN 502 B
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6 |
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1.63 |
3.37 |
78.5 |
-2.27 |
-0.06 |
21.0 |
85 |
10 |
8 |
17 |
2 |
7 |
0 |
0 |
SO4 506 A PEG 507 A MSE 231 B MES 503 B CL 508 B
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7 |
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1.39 |
1.58 |
80.3 |
-1.82 |
-0.43 |
15.6 |
86 |
10 |
4 |
17 |
2 |
1 |
2 |
0 |
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8 |
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1.37 |
1.86 |
86.9 |
-2.30 |
-0.16 |
21.5 |
85 |
10 |
11 |
17 |
2 |
7 |
0 |
0 |
MSE 231 A SO4 506 A PEG 507 A ZN 501 B MES 503 B
CL 508 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program