 |
PDBsum entry 4tyw
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 4tyw calculated with  MOLE 2.0
|
PDB id
|
|
|
|
4tyw
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
4 tunnels,
coloured by tunnel radius |
|
3 tunnels,
coloured by
tunnel radius
|
3 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.44 |
1.50 |
18.9 |
-0.62 |
-0.71 |
9.1 |
103 |
|
0 |
2 |
3 |
1 |
0 |
0 |
0 |
|
DA 2 B DA 3 B
|
 |
|
2 |
 |
1.52 |
1.67 |
22.9 |
-2.11 |
-0.68 |
26.4 |
88 |
2 |
3 |
2 |
1 |
0 |
1 |
0 |
DA 3 B DA 4 B
|
 |
3 |
 |
1.53 |
1.67 |
22.9 |
-2.12 |
-0.68 |
25.7 |
87 |
3 |
3 |
2 |
1 |
0 |
1 |
0 |
DA 3 B DA 4 B
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program