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PDBsum entry 4tqb

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 4tqb calculated with MOLE 2.0 PDB id
4tqb
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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1 tunnel, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.34 1.56 23.9 0.63 0.42 6.7 66 1 1 2 4 4 0 0  
2 1.29 1.48 38.6 -0.51 -0.06 14.7 75 3 2 3 4 4 0 0  
3 1.31 2.39 21.6 -2.06 0.33 18.9 73 5 0 2 0 3 0 0  MGT 301 A
4 1.30 1.92 22.4 -2.85 0.19 28.0 75 6 0 3 0 3 0 0  MGT 301 A
5 1.48 1.48 24.0 -1.26 0.30 14.4 69 4 1 3 2 5 0 0  MGT 301 A
6 1.47 1.48 24.8 -1.55 0.17 18.6 68 5 1 3 2 5 0 0  MGT 301 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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