 |
PDBsum entry 4s0h
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 4s0h calculated with MOLE 2.0
|
PDB id
|
|
|
|
4s0h
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
5 tunnels,
coloured by tunnel radius |
 |
5 tunnels,
coloured by
tunnel radius
|
5 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.27 |
2.49 |
28.3 |
0.31 |
0.16 |
14.1 |
78 |
 |
3 |
3 |
0 |
6 |
1 |
2 |
0 |
 |
|
 |
 |
2 |
 |
1.29 |
2.26 |
31.2 |
0.24 |
0.19 |
13.2 |
77 |
4 |
1 |
0 |
6 |
1 |
3 |
0 |
|
 |
3 |
 |
1.49 |
2.77 |
34.0 |
1.01 |
0.52 |
12.7 |
78 |
3 |
2 |
0 |
10 |
1 |
2 |
0 |
|
 |
4 |
 |
1.49 |
2.98 |
51.2 |
0.18 |
0.20 |
8.9 |
74 |
5 |
1 |
2 |
11 |
5 |
4 |
0 |
DG 11 D
|
 |
5 |
 |
1.53 |
2.59 |
61.7 |
-0.12 |
0.11 |
12.0 |
78 |
9 |
3 |
4 |
12 |
3 |
4 |
0 |
DT 11 C DT 12 C
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |