PDBsum entry 4ruc Go to PDB code:  Tunnel analysis for: 4ruc calculated with MOLE 2.0 PDB id 4ruc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.93 1.93 22.1 2.01 0.92 11.7 90 2 0 0 6 0 0 0  DT 512 P DA 513 P DA 403 T DT 404 T MF7 405 T DT 406 T DA 407 T 2 1.92 2.05 26.0 -1.69 -0.07 31.9 90 4 0 1 2 0 0 0  DG 505 P DA 506 P DG 509 P DA 510 P DA 407 T DA 408 T DT 409 T DC 410 T 3 1.91 1.91 33.1 0.97 0.60 15.7 93 3 0 0 6 0 0 0  DT 404 T MF7 405 T DT 406 T DA 407 T Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.