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PDBsum entry 4rrx

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protein ligands Protein-protein interface(s) links
Oxidoreductase PDB id
4rrx

 

 

 

 

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Contents
Protein chains
552 a.a.
Ligands
NAG-NAG ×2
NAG ×4
BOG ×2
LUR ×2
Waters ×213
PDB id:
4rrx
Name: Oxidoreductase
Title: Crystal structure of apo murine v89w cyclooxygenase-2 complexed with lumiracoxib
Structure: Prostaglandin g/h synthase 2. Chain: a, b. Synonym: cyclooxygenase-2, cox-2, glucocorticoid-regulated inflammatory cyclooxygenase, gripghs, macrophage activation- associated marker protein p71/73, pes-2, phs ii, prostaglandin h2 synthase 2, pgh synthase 2, pghs-2, prostaglandin-endoperoxide synthase 2, tis10 protein. Engineered: yes. Mutation: yes
Source: Mus musculus. Mouse. Organism_taxid: 10090. Gene: ptgs2, cox-2, cox2, pghs-b, tis10. Expressed in: spodoptera frugiperda. Expression_system_taxid: 7108.
Resolution:
2.78Å     R-factor:   0.250     R-free:   0.277
Authors: S.Xu,A.L.Blobaum,S.Banerjee,L.J.Marnett
Key ref: A.L.Blobaum et al. (2015). Action at a distance: mutations of peripheral residues transform rapid reversible inhibitors to slow, tight binders of cyclooxygenase-2. J Biol Chem, 290, 12793-12803. PubMed id: 25825493 DOI: 10.1074/jbc.M114.635987
Date:
06-Nov-14     Release date:   08-Apr-15    
PROCHECK
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 Headers
 References

Protein chains
Q05769  (PGH2_MOUSE) -  Prostaglandin G/H synthase 2 from Mus musculus
Seq:
Struc:
 
Seq:
Struc:
604 a.a.
552 a.a.*
Key:    Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.1.14.99.1  - prostaglandin-endoperoxide synthase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: (5Z,8Z,11Z,14Z)-eicosatetraenoate + AH2 + 2 O2 = prostaglandin H2 + A + H2O
(5Z,8Z,11Z,14Z)-eicosatetraenoate
+ AH2
+ 2 × O2
= prostaglandin H2
+
+ H2O
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
DOI no: 10.1074/jbc.M114.635987 J Biol Chem 290:12793-12803 (2015)
PubMed id: 25825493  
 
 
Action at a distance: mutations of peripheral residues transform rapid reversible inhibitors to slow, tight binders of cyclooxygenase-2.
A.L.Blobaum, S.Xu, S.W.Rowlinson, K.C.Duggan, S.Banerjee, S.N.Kudalkar, W.R.Birmingham, K.Ghebreselasie, L.J.Marnett.
 
  ABSTRACT  
 
No abstract given.

 

 

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