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PDBsum entry 4rpy
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Pore analysis for: 4rpy calculated with  MOLE 2.0
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PDB id
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4rpy
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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2 pores,
coloured by radius |
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3 pores,
coloured by radius
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3 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.45 |
1.57 |
37.0 |
-1.01 |
-0.61 |
15.1 |
79 |
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3 |
1 |
0 |
2 |
0 |
0 |
0 |
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DG 4 D DG 5 D DT 6 P DC 1 T DA 4 T DC 5 T 8OG 6 T
DG 7 T DC 8 T ACT 103 T
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2 |
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2.70 |
2.71 |
42.3 |
-1.65 |
-0.30 |
22.1 |
86 |
4 |
4 |
2 |
1 |
1 |
1 |
0 |
PPV 413 A DT 6 P DG 7 P DC 8 P DG 9 P DC 10 P MG
101 P
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3 |
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2.07 |
2.07 |
46.3 |
-1.19 |
-0.72 |
8.0 |
90 |
3 |
0 |
2 |
1 |
0 |
0 |
0 |
CL 408 A DT 6 P DG 7 P DC 8 P DA 11 T DT 12 T DC
13 T DA 14 T
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program