spacer
spacer

PDBsum entry 4rm9

Go to PDB code: 
Top Page protein pores links
Pore analysis for: 4rm9 calculated with MOLE 2.0 PDB id
4rm9
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.79 2.56 26.2 -1.66 0.01 30.4 76 6 1 0 2 1 1 0  
2 1.21 3.80 53.2 -1.08 -0.31 15.6 82 3 6 5 7 2 1 0  
3 1.85 1.91 89.8 -1.85 -0.19 27.4 77 8 5 1 5 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer