spacer
spacer

PDBsum entry 4r9u

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4r9u calculated with MOLE 2.0 PDB id
4r9u
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
12 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.01 1.91 26.6 1.19 0.59 5.8 72 1 2 1 8 2 0 0  
2 1.38 1.88 35.1 -2.19 -0.57 23.1 95 7 4 8 2 0 0 0  
3 1.19 1.43 46.9 1.77 0.44 1.4 87 0 0 1 20 0 0 0  
4 1.21 1.98 52.1 1.69 0.48 1.4 85 0 0 1 19 1 1 0  
5 1.14 2.21 55.6 -1.35 -0.46 12.8 85 5 3 11 3 2 1 2  ANP 301 D
6 1.20 1.35 56.0 1.75 0.46 1.3 84 0 0 2 20 1 0 0  
7 1.13 2.21 56.3 -1.27 -0.44 13.2 85 5 3 12 3 2 1 2  ANP 301 D
8 1.14 1.31 149.8 -0.37 -0.04 14.6 79 3 3 4 12 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer