PDBsum entry 4r2d Go to PDB code:  Tunnel analysis for: 4r2d calculated with MOLE 2.0 PDB id 4r2d Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.44 1.45 15.5 -0.71 -0.46 12.6 91 3 0 1 1 0 0 0  DG 6 B DG 7 B 2 1.19 1.36 20.7 -1.84 -0.45 23.1 89 3 0 2 0 1 0 0  DG 6 B DG 7 B DA 2 C 5FC 3 C 3 1.32 1.57 15.1 -0.84 -0.65 10.9 93 2 0 0 1 0 0 0  DG 2 B DC 3 B DG 4 B 4 1.40 1.40 22.1 -1.61 -0.54 23.0 81 3 1 0 1 1 0 0  DG 2 B DC 3 B DG 4 B 5 1.33 1.58 28.9 -1.41 -0.35 24.1 85 5 1 0 2 1 0 0  DA 1 B DG 2 B DC 3 B DG 4 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.