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PDBsum entry 4r2c

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Top Page protein dna_rna metals tunnels links
Tunnel analysis for: 4r2c calculated with MOLE 2.0 PDB id
4r2c
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.17 1.28 15.1 -2.63 -0.78 32.9 93 2 1 1 0 0 0 0  DT 5 B DC 6 C DC 7 C DA 8 C
2 1.12 1.24 15.5 -1.53 -0.51 21.2 78 4 1 0 0 1 0 0  DG 6 B DG 7 B DG 8 B DG 10 C
3 1.41 1.93 19.3 -1.25 -0.61 18.3 85 3 1 0 1 1 0 0  DG 2 B DC 3 B DG 4 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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