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PDBsum entry 4r09
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Pore analysis for: 4r09 calculated with  MOLE 2.0
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PDB id
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4r09
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.14 |
2.17 |
66.6 |
-0.82 |
-0.03 |
11.9 |
77 |
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4 |
5 |
5 |
3 |
7 |
2 |
0 |
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UPT 904 D
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2 |
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2.26 |
2.43 |
76.9 |
-2.33 |
-0.41 |
24.7 |
87 |
12 |
4 |
8 |
3 |
2 |
0 |
0 |
NAG 908 D NAG 1 L NAG 2 L BMA 3 L
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3 |
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2.59 |
4.49 |
29.3 |
-1.37 |
-0.24 |
13.9 |
85 |
1 |
2 |
5 |
1 |
2 |
0 |
0 |
URI 901 A
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4 |
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1.82 |
1.89 |
57.6 |
-1.30 |
-0.09 |
25.1 |
83 |
8 |
4 |
2 |
6 |
2 |
0 |
0 |
06S 902 A NAG 2 F
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5 |
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2.08 |
2.10 |
91.2 |
-1.92 |
-0.13 |
25.9 |
80 |
9 |
5 |
7 |
5 |
6 |
0 |
0 |
06S 902 A NAG 1 F NAG 2 F NAG 2 I
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6 |
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1.40 |
1.36 |
154.2 |
-1.94 |
-0.23 |
24.9 |
81 |
13 |
9 |
10 |
5 |
8 |
0 |
0 |
NAG 1 F NAG 2 F NAG 2 I
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program