PDBsum entry 4r09 Go to PDB code:  Tunnel analysis for: 4r09 calculated with MOLE 2.0 PDB id 4r09 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.44 1.91 19.1 1.74 0.63 3.8 89 1 0 3 6 0 0 0   2 1.10 3.24 18.1 0.98 0.24 3.9 72 0 1 2 7 1 1 0   3 1.24 2.88 17.5 2.34 0.59 1.0 75 0 0 2 6 1 0 0   4 1.20 1.20 15.9 -0.38 -0.15 10.9 79 0 3 1 2 1 1 0   5 1.12 2.53 16.7 1.48 0.64 7.6 66 1 0 0 5 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.