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PDBsum entry 4qz3

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Pore analysis for: 4qz3 calculated with MOLE 2.0 PDB id
4qz3
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.85 2.08 63.5 -0.94 -0.12 15.4 75 7 8 5 5 6 2 0  
2 1.98 2.07 115.6 -2.23 -0.49 23.5 79 13 8 7 3 6 0 0  
3 1.91 2.05 123.3 -2.48 -0.54 26.2 77 16 10 5 1 6 0 0  
4 1.28 1.68 133.8 -1.74 -0.39 20.6 78 16 8 7 7 5 1 0  
5 1.79 2.08 137.0 -1.61 -0.43 17.2 86 9 4 11 9 5 1 0  04C 301 K
6 1.78 2.08 140.8 -1.47 -0.31 19.3 87 12 5 12 10 5 1 0  04C 301 K
7 1.79 2.06 144.7 -1.83 -0.47 19.2 85 13 6 9 7 5 1 0  04C 301 K
8 1.32 1.37 150.3 -1.43 -0.40 18.6 84 10 10 13 11 5 1 0  04C 301 K MES 303 K
9 1.31 1.26 152.7 -2.12 -0.47 22.9 82 16 12 13 7 5 0 0  
10 1.79 2.05 149.9 -0.82 -0.36 12.9 88 9 7 14 14 3 3 0  04C 301 K 04C 301 Y
11 1.79 2.37 157.1 -2.02 -0.51 24.1 87 14 9 12 9 2 2 0  04C 301 K
12 1.49 1.58 155.1 -1.30 -0.36 15.9 85 12 4 12 13 4 2 0  04C 301 K
13 1.82 2.07 161.9 -1.79 -0.26 21.2 74 19 9 7 6 12 2 0  
14 1.78 3.33 160.8 -1.89 -0.38 22.4 85 20 5 14 12 6 2 0  04C 301 K
15 1.30 1.26 171.3 -1.72 -0.43 18.7 87 13 9 17 14 4 1 0  04C 301 K
16 1.55 2.94 176.4 -2.32 -0.49 24.3 80 20 11 13 5 6 0 0  
17 1.67 1.84 178.6 -1.39 -0.34 18.4 83 13 9 13 11 6 4 0  04C 301 K
18 1.35 1.31 191.3 -1.68 -0.29 20.0 79 19 11 15 12 11 2 0  
19 1.84 1.99 189.5 -1.24 -0.25 15.2 81 15 7 14 12 10 3 0  04C 301 K
20 1.83 2.12 204.8 -1.57 -0.43 18.3 84 17 11 14 9 5 2 0  04C 301 Y
21 1.95 3.03 207.0 -2.19 -0.44 23.2 84 20 9 14 5 7 0 0  
22 1.84 2.24 209.7 -1.63 -0.44 18.1 84 17 11 14 9 5 2 0  04C 301 K
23 1.87 2.03 205.0 -2.44 -0.52 23.6 82 20 10 12 2 7 0 0  
24 1.50 2.96 215.0 -1.83 -0.30 20.7 77 23 10 15 10 12 2 0  
25 1.55 2.96 223.3 -2.56 -0.57 26.5 83 22 13 14 4 4 1 0  
26 1.77 1.76 227.0 -2.37 -0.47 24.4 83 28 9 16 6 8 1 0  
27 1.94 2.00 243.6 -1.95 -0.33 20.8 78 24 9 13 7 13 2 0  
28 1.38 1.52 244.9 -1.95 -0.41 21.7 81 21 13 15 6 8 3 0  
29 1.75 2.36 261.9 -2.07 -0.38 23.2 80 25 12 16 9 10 3 0  
30 1.69 3.31 265.7 -2.01 -0.32 22.2 80 31 8 18 11 14 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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