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PDBsum entry 4qw1

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4qw1 calculated with MOLE 2.0 PDB id
4qw1
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.61 2.01 84.0 -1.31 -0.31 21.3 83 9 7 4 8 1 3 0  
2 1.94 2.15 102.7 -2.50 -0.44 26.6 76 15 7 4 2 7 1 0  
3 1.78 2.65 109.6 -2.51 -0.48 29.1 79 16 7 6 3 7 1 0  
4 1.56 1.86 110.7 -1.81 -0.27 22.5 78 13 7 7 6 7 1 1  
5 1.78 2.83 112.9 -2.52 -0.47 29.1 77 14 9 5 3 3 2 0  
6 1.83 2.74 115.2 -2.88 -0.59 31.4 77 17 9 4 1 4 1 0  
7 1.22 1.21 121.2 -2.01 -0.36 22.8 82 12 10 11 8 5 1 0  
8 1.76 1.77 122.9 -1.50 -0.23 18.5 76 13 6 9 8 8 3 0  
9 1.74 1.74 127.7 -1.86 -0.32 22.4 76 18 9 7 7 6 3 0  
10 1.60 1.84 127.8 -1.36 -0.20 16.3 77 15 7 10 9 8 4 0  
11 1.28 1.26 131.6 -2.27 -0.44 24.7 81 16 11 9 6 7 0 0  
12 1.28 1.27 160.9 -1.55 -0.28 18.5 79 15 10 13 13 7 3 0  
13 2.38 3.51 162.5 -1.93 -0.41 22.1 83 15 5 10 4 6 1 0  
14 1.61 1.64 167.0 -1.45 -0.23 16.7 77 17 8 12 10 11 4 0  
15 0.98 1.19 179.1 -1.50 -0.44 15.2 84 12 6 15 10 7 1 0  BO2 301 Y
16 1.58 1.92 184.1 -2.00 -0.38 20.5 81 18 6 13 5 9 2 0  
17 1.17 1.16 190.6 -1.47 -0.26 17.7 80 18 12 15 14 10 3 0  
18 1.04 1.24 191.7 -1.11 -0.28 11.9 80 11 7 17 14 9 3 0  BO2 301 Y
19 1.75 1.76 193.3 -1.44 -0.24 16.9 78 15 7 13 8 8 4 0  
20 2.05 2.20 191.1 -2.31 -0.44 24.5 80 21 7 9 2 9 1 0  
21 1.67 2.70 205.2 -1.43 -0.21 16.4 77 17 7 15 10 11 3 1  
22 1.70 1.74 207.7 -1.75 -0.29 20.0 79 20 8 14 7 10 3 0  
23 1.37 1.48 217.6 -2.04 -0.42 22.0 83 19 10 17 10 8 1 0  
24 1.78 1.78 214.2 -1.77 -0.28 18.6 77 20 8 12 6 11 3 0  
25 1.09 1.22 219.4 -1.70 -0.44 16.7 85 16 10 21 15 9 0 0  BO2 301 Y
26 1.76 1.76 223.8 -1.91 -0.33 21.1 78 19 11 14 8 8 4 0  
27 1.33 1.32 224.3 -2.06 -0.39 21.1 83 21 11 19 10 11 1 0  
28 1.19 1.19 231.3 -2.32 -0.45 23.9 82 25 11 15 7 11 0 0  
29 1.33 1.32 236.6 -1.68 -0.29 18.2 81 18 11 20 13 10 3 0  
30 1.57 1.55 250.1 -1.07 -0.15 12.3 77 17 9 19 14 13 6 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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