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PDBsum entry 4qvv

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Pore analysis for: 4qvv calculated with MOLE 2.0 PDB id
4qvv
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.34 1.43 43.7 -2.21 -0.51 27.1 79 6 7 2 4 2 0 0  
2 1.54 1.54 74.9 -2.66 -0.57 29.8 80 9 10 3 2 3 1 0  
3 1.47 1.51 79.2 -2.23 -0.62 24.9 83 4 7 4 1 2 0 0  
4 1.44 1.46 87.0 -2.42 -0.42 23.7 76 9 8 4 3 5 1 0  
5 1.71 1.73 113.4 -1.80 -0.33 22.8 77 16 9 7 8 7 3 0  
6 1.54 1.54 114.3 -2.60 -0.64 30.4 81 11 14 4 2 3 1 0  
7 1.76 2.97 122.3 -2.76 -0.60 31.3 82 18 11 7 3 5 0 0  
8 1.41 1.76 124.9 -2.71 -0.61 28.4 84 14 9 11 2 4 0 0  
9 1.60 2.32 128.7 -2.14 -0.45 24.6 81 17 10 10 5 6 0 1  
10 1.77 1.76 138.8 -1.91 -0.32 23.9 76 17 10 7 8 5 3 0  
11 1.72 2.21 170.3 -2.39 -0.50 27.9 82 18 16 12 6 6 0 0  
12 1.49 1.51 178.8 -1.37 -0.35 14.8 83 15 7 16 13 9 0 1  BO2 301 K
13 1.37 1.56 180.0 -1.58 -0.39 16.6 85 12 6 16 9 9 0 0  BO2 301 K
14 1.48 1.50 183.0 -1.69 -0.39 19.0 84 17 8 14 10 10 0 0  BO2 301 K
15 1.72 1.96 187.4 -1.72 -0.35 19.4 78 19 12 12 9 9 3 0  
16 1.53 1.54 192.7 -1.66 -0.40 18.1 83 17 8 15 9 10 0 0  BO2 301 K
17 1.50 1.52 197.5 -1.67 -0.41 16.6 81 17 8 13 8 11 0 0  BO2 301 K
18 1.43 1.44 200.0 -1.81 -0.44 19.6 82 16 10 15 10 8 0 0  BO2 301 K
19 1.49 1.50 207.4 -1.17 -0.28 12.9 80 13 8 16 14 10 3 0  BO2 301 K
20 1.64 2.56 211.8 -1.58 -0.28 17.0 79 20 7 15 11 9 3 1  
21 1.79 1.75 216.0 -1.93 -0.33 21.0 80 22 8 14 8 10 3 0  
22 1.76 1.94 217.3 -2.58 -0.57 26.8 84 25 11 15 3 7 0 0  
23 1.79 1.74 220.0 -1.94 -0.35 19.1 78 22 8 11 7 9 3 0  
24 1.45 1.46 222.9 -1.62 -0.38 18.7 84 15 13 18 13 10 0 0  BO2 301 K
25 1.78 1.99 224.6 -2.73 -0.61 28.1 83 23 13 14 4 5 0 0  
26 1.81 2.08 222.1 -2.62 -0.58 25.6 81 25 11 12 2 8 0 0  
27 1.63 1.64 232.0 -2.00 -0.42 20.5 80 21 11 15 8 7 3 0  
28 1.40 1.39 232.8 -1.79 -0.47 18.4 83 16 12 18 9 10 0 0  BO2 301 K
29 1.27 1.41 231.3 -1.38 -0.25 15.6 78 20 7 14 14 8 4 0  
30 1.43 1.45 239.9 -1.19 -0.26 13.3 80 16 9 18 16 13 3 0  BO2 301 K

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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