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PDBsum entry 4qvq

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Pore analysis for: 4qvq calculated with MOLE 2.0 PDB id
4qvq
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.28 1.32 67.0 -2.35 -0.40 20.8 74 6 5 4 2 5 1 0  
2 1.88 2.12 80.9 -2.57 -0.42 26.6 76 12 6 3 2 6 0 0  
3 1.61 1.99 85.4 -1.36 -0.29 22.7 83 9 6 4 7 1 2 0  
4 1.57 1.88 87.5 -1.74 -0.23 21.1 77 10 6 7 5 6 1 1  
5 1.84 3.01 91.1 -2.57 -0.42 28.8 79 13 6 6 3 6 0 0  
6 1.37 1.48 93.7 -2.49 -0.48 24.7 81 9 5 9 4 5 0 0  
7 1.67 2.85 98.0 -2.61 -0.47 29.2 77 11 8 4 3 2 1 0  
8 1.20 1.26 103.4 -1.98 -0.34 21.4 83 9 8 10 8 4 0 0  
9 1.19 1.23 129.9 -2.38 -0.44 25.8 81 16 10 8 5 7 0 0  
10 1.23 1.26 137.3 -2.36 -0.45 27.6 83 17 10 11 6 6 0 0  
11 1.28 1.28 135.5 -2.39 -0.48 26.6 85 15 11 12 8 5 0 0  
12 2.34 3.60 142.0 -1.92 -0.38 20.5 84 11 4 9 4 5 0 0  
13 1.37 1.43 145.8 -1.50 -0.34 16.6 82 9 6 11 10 9 0 0  BO2 301 K
14 1.06 1.20 163.9 -1.46 -0.42 14.0 85 8 6 14 10 7 0 0  BO2 301 Y
15 1.92 2.99 166.3 -2.33 -0.41 25.0 83 18 6 10 3 7 1 0  
16 1.39 1.41 169.5 -1.47 -0.40 15.3 84 9 6 14 10 8 0 0  BO2 301 K
17 1.92 2.44 168.4 -2.38 -0.48 22.5 82 18 6 8 3 6 0 0  
18 1.30 1.34 175.7 -1.49 -0.37 15.6 82 13 7 16 12 9 1 1  BO2 301 K
19 1.60 1.97 176.2 -1.85 -0.41 19.2 82 17 6 11 8 6 2 1  
20 1.36 1.38 181.6 -1.84 -0.45 17.6 85 11 7 17 10 9 0 0  BO2 301 K
21 1.72 2.96 184.2 -2.48 -0.56 25.2 83 17 9 10 5 3 1 0  
22 1.15 1.28 191.4 -1.25 -0.43 11.3 85 6 8 19 16 10 0 0  BO2 301 K BO2 301 Y
23 1.33 1.36 193.8 -1.85 -0.43 19.3 83 16 8 15 9 10 1 0  BO2 301 K
24 1.21 1.20 191.4 -2.11 -0.45 21.7 86 16 10 15 9 4 0 0  
25 1.31 1.35 195.9 -1.84 -0.47 17.0 82 16 8 13 9 9 0 0  BO2 301 K
26 1.31 1.34 203.0 -2.03 -0.50 20.7 84 15 11 14 11 6 1 0  BO2 301 K
27 1.25 1.29 203.7 -1.50 -0.41 15.5 83 15 8 16 14 9 2 0  BO2 301 K
28 1.26 1.30 209.9 -1.72 -0.43 17.5 86 14 12 19 16 7 0 0  BO2 301 K
29 1.29 1.32 211.8 -2.01 -0.53 19.7 83 15 11 15 11 6 1 0  BO2 301 K
30 1.27 1.31 219.0 -1.75 -0.45 17.5 86 14 12 20 15 7 0 0  BO2 301 K

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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