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PDBsum entry 4quy

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Top Page protein metals Protein-protein interface(s) pores links
Pore analysis for: 4quy calculated with MOLE 2.0 PDB id
4quy
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.61 2.72 44.6 -1.27 -0.26 19.2 71 4 4 2 2 4 1 0  
2 1.14 1.14 50.1 -1.54 -0.45 21.2 86 6 4 6 6 1 0 0  
3 1.63 1.70 54.0 -0.83 -0.11 11.1 79 5 1 6 5 6 0 0  
4 1.70 1.70 60.4 -2.23 -0.66 26.6 82 4 7 2 1 1 0 0  
5 1.33 1.42 67.1 -1.63 -0.33 22.1 72 5 11 2 4 3 3 0  
6 1.87 2.09 94.6 -2.61 -0.46 28.6 76 12 7 4 2 7 0 0  
7 1.71 2.84 101.7 -2.51 -0.40 29.3 79 14 6 7 4 8 0 0  
8 1.39 1.40 103.2 -1.02 -0.26 16.3 79 7 7 9 12 5 2 0  
9 1.62 1.89 105.2 -2.52 -0.48 27.9 83 15 9 8 3 5 0 0  
10 1.76 2.91 106.8 -2.36 -0.45 28.2 78 12 6 6 4 3 1 0  
11 1.81 3.21 124.4 -2.60 -0.43 28.2 80 19 8 9 4 7 1 0  
12 1.75 1.77 125.8 -1.76 -0.25 21.0 75 12 6 9 8 9 2 0  
13 1.20 1.18 148.6 -1.43 -0.34 15.3 80 10 6 14 6 10 0 0  
14 2.46 3.66 179.8 -2.18 -0.44 23.1 83 17 6 12 4 6 1 0  
15 1.66 1.90 179.3 -2.22 -0.50 22.0 85 15 7 13 4 5 0 0  
16 1.77 1.84 184.1 -1.56 -0.28 18.5 79 13 6 13 8 8 2 0  
17 1.43 1.44 182.9 -1.74 -0.41 21.0 83 14 7 12 8 8 0 0  
18 1.15 1.15 195.7 -1.35 -0.41 16.1 82 13 13 16 11 10 0 0  
19 1.44 1.64 192.6 -1.85 -0.44 22.2 83 15 12 13 8 8 0 0  
20 1.62 3.31 196.7 -2.58 -0.44 28.8 83 26 8 12 4 10 0 0  
21 1.62 1.94 203.2 -1.79 -0.28 21.2 80 20 8 14 8 10 2 0  
22 1.86 3.16 199.9 -2.65 -0.52 27.5 83 25 9 11 3 9 0 0  
23 1.73 3.04 211.1 -2.55 -0.53 27.4 83 25 9 13 6 6 1 0  
24 1.73 1.70 211.6 -1.88 -0.34 19.8 79 19 9 13 7 9 2 0  
25 1.85 2.68 222.9 -1.85 -0.36 20.5 80 19 9 15 10 6 3 0  
26 1.34 1.27 222.6 -2.30 -0.45 24.4 85 24 12 18 11 8 0 0  
27 1.28 1.21 234.3 -1.69 -0.33 18.3 82 18 11 20 15 8 2 0  
28 1.38 1.38 232.5 -2.10 -0.49 23.5 84 22 14 17 7 9 0 0  
29 1.68 2.15 239.1 -2.25 -0.50 27.1 84 24 14 13 7 9 0 0  
30 1.43 1.50 244.2 -1.48 -0.33 17.6 81 16 14 19 12 9 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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