PDBsum entry 4qj4 Go to PDB code:  Pore analysis for: 4qj4 calculated with MOLE 2.0 PDB id 4qj4 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   12 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.28 3.93 27.4 -2.65 -0.70 27.1 77 2 3 3 2 0 1 0   2 2.47 2.91 32.9 -2.32 -0.58 22.2 85 2 3 5 2 0 2 0   3 1.60 1.60 33.7 -2.38 -0.59 19.8 82 5 3 2 1 1 1 0   4 1.34 1.58 34.2 -1.27 -0.41 16.9 79 5 2 3 2 1 0 0   5 3.44 4.54 35.1 -1.64 -0.23 22.8 75 4 4 4 3 3 2 0   6 1.84 2.19 38.0 -2.11 -0.52 24.2 87 5 3 3 2 1 1 0  GDP 400 A 7 2.70 3.35 38.0 -2.65 -0.58 27.1 78 2 4 3 3 1 2 0   8 1.60 1.58 38.8 -2.19 -0.69 18.8 85 5 4 4 2 0 1 0   9 1.98 2.03 40.1 -1.30 -0.21 16.6 83 6 2 5 3 2 2 0  GDP 400 A 10 1.83 2.19 43.0 -2.03 -0.64 22.8 89 5 4 5 3 0 1 0  GDP 400 A 11 1.60 1.59 59.1 -0.97 -0.18 14.3 78 7 4 6 5 3 3 0   12 2.72 3.38 59.8 -1.18 -0.14 17.8 76 5 3 4 5 4 4 0   13 1.31 2.09 90.3 -0.65 -0.21 17.4 80 5 5 5 8 3 3 1   14 2.69 3.86 99.0 -2.07 -0.49 26.7 78 8 9 7 4 3 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.