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PDBsum entry 4qht

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Pore analysis for: 4qht calculated with MOLE 2.0 PDB id
4qht
Pores calculated on whole structure Pores calculated excluding ligands

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11 pores, coloured by radius 24 pores, coloured by radius 24 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.38 2.39 26.8 -1.91 -0.49 28.6 84 4 3 0 3 0 1 0  
2 2.35 4.78 30.6 -3.45 -0.77 36.8 84 7 7 3 1 0 0 0  ANP 401 C MG 402 C EDO 403 D
3 2.49 2.87 31.5 -1.45 -0.44 22.8 80 4 2 1 3 2 1 0  
4 3.32 4.29 39.0 -2.06 -0.61 24.6 88 2 4 3 1 1 0 0  
5 1.85 1.85 39.9 -1.64 -0.31 27.7 83 6 6 3 7 0 0 0  EDO 403 A ANP 401 G MG 402 G
6 1.35 1.53 40.7 -0.76 -0.22 20.0 79 4 7 1 7 1 1 0  ANP 401 B MG 402 B EDO 403 C
7 1.35 1.52 47.4 -0.96 -0.05 24.6 79 7 4 1 6 1 1 0  ANP 401 B
8 2.36 2.36 47.7 -0.73 -0.50 11.0 88 0 2 1 3 2 0 0  
9 2.40 3.41 52.7 -2.84 -0.54 35.2 83 7 8 5 3 0 0 0  ANP 401 B MG 402 B EDO 403 C
10 2.39 3.92 59.0 -2.32 -0.50 29.8 84 7 7 4 3 1 1 0  ANP 401 G MG 402 G
11 1.82 1.81 62.2 -1.51 -0.23 28.0 82 8 4 1 8 1 1 0  ANP 401 G
12 2.39 2.39 61.9 -1.93 -0.53 24.2 86 6 8 5 6 0 1 0  ANP 401 B MG 402 B EDO 403 C
13 2.43 2.42 62.4 -2.13 -0.47 28.7 83 10 5 3 5 0 1 0  
14 1.83 3.09 73.7 -1.39 -0.12 23.3 71 3 5 1 4 2 1 0  
15 2.58 4.37 77.6 -1.65 -0.42 20.2 86 4 8 5 4 2 1 0  ANP 401 E MG 402 E
16 2.54 3.68 101.6 -2.64 -0.70 27.7 83 7 9 6 3 0 3 0  EDO 403 A ANP 401 F MG 402 F EDO 403 G
17 1.81 3.11 106.7 -2.06 -0.53 21.8 77 5 7 7 6 3 4 0  EDO 403 C
18 2.12 2.81 106.4 -1.34 -0.41 19.3 85 4 9 4 4 4 1 0  
19 2.48 3.89 111.0 -2.37 -0.69 24.1 82 10 11 9 4 0 3 1  ANP 401 A MG 402 A EDO 403 A
20 2.18 3.02 113.1 -2.34 -0.67 26.4 82 11 10 9 6 0 3 0  ANP 401 A MG 402 A EDO 403 C
21 2.16 2.86 115.8 -1.72 -0.49 20.2 86 6 12 6 6 3 1 0  ANP 401 D MG 402 D EDO 403 E
22 2.45 2.81 124.9 -2.10 -0.54 23.6 86 12 15 7 7 1 2 0  ANP 401 D MG 402 D ANP 401 E MG 402 E EDO 403 E
EDO 403 F
23 2.46 2.81 130.1 -1.91 -0.49 24.5 86 11 11 7 7 2 2 0  ANP 401 E MG 402 E
24 1.33 1.50 166.0 -1.03 -0.34 16.9 84 9 13 7 11 6 2 0  ANP 401 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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