PDBsum entry 4qg0

Pore analysis for: 4qg0 calculated with

MOLE 2.0

PDB id

4qg0

Pores calculated on whole structure

Pores calculated excluding ligands

View options

MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

6 pores, coloured by radius

14 pores, coloured by radius

14 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

2.62

3.03

35.0

-1.70

-0.42

23.6

82

8

4

4

3

1

1

0

DUT 702 A MG 706 A

2

1.34

1.43

68.3

-0.82

-0.06

19.9

85

10

4

5

10

4

0

0

DGT 701 B MG 704 C DUT 701 D

3

1.33

1.89

73.7

-2.44

-0.56

25.1

84

9

5

2

1

1

0

0

DGT 702 C

4

1.59

1.58

83.5

-2.11

-0.33

23.6

73

14

6

4

2

4

0

4

5

1.39

1.39

110.2

-2.06

-0.28

23.2

74

14

8

4

2

5

1

3

6

1.26

1.73

129.7

-1.22

-0.28

17.6

82

18

6

8

12

6

0

2

7

1.33

1.33

133.6

-1.53

-0.36

17.9

80

18

8

7

9

6

2

2

8

1.39

1.39

133.0

-1.78

-0.32

23.7

80

13

8

5

6

4

3

0

DUT 701 D

9

1.33

1.32

133.4

-1.56

-0.32

19.1

80

18

8

6

9

7

1

1

10

1.16

3.73

145.5

-1.96

-0.23

24.0

73

23

8

5

8

12

1

4

MG 705 A DUT 703 B DGT 702 D

11

1.42

1.77

185.9

-2.06

-0.35

23.7

79

24

9

4

7

6

1

1

DUT 703 A MG 704 A DGT 702 C

12

1.18

1.34

191.1

-1.97

-0.42

20.7

79

24

9

10

7

6

3

1

DUT 703 A

13

1.23

1.37

246.3

-1.90

-0.31

23.7

78

29

16

10

15

11

5

2

MG 705 A DUT 703 B DGT 702 D

14

1.19

1.29

292.9

-2.13

-0.54

22.0

79

25

14

16

7

6

4

2

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.