PDBsum entry 4q4z Go to PDB code:  Pore analysis for: 4q4z calculated with MOLE 2.0 PDB id 4q4z Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   28 pores, coloured by radius 22 pores, coloured by radius 22 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.72 2.72 30.1 -2.67 -0.51 36.1 83 6 2 0 2 0 0 0  DT 3 G DG 4 G DC 5 G DA 21 H DT 22 H DG 23 H DC 24 H 2 1.41 1.79 37.0 -0.87 -0.38 20.4 87 6 4 3 3 0 1 0   3 1.79 3.17 56.7 -1.28 -0.36 24.2 85 8 6 3 4 0 1 0   4 1.29 1.38 63.7 -1.86 -0.40 28.1 78 8 8 1 7 1 1 0   5 3.67 3.84 64.6 -1.65 -0.61 18.2 80 5 4 3 2 1 4 0  DG 4 G DC 5 G DA 6 G DT 7 G DA 17 H DC 18 H 6 1.58 1.82 76.2 -2.29 -0.58 29.7 83 10 8 3 2 0 1 0   7 3.55 3.54 92.8 -1.91 -0.36 22.1 74 7 6 3 4 2 8 0  DC 16 H DA 17 H 8 1.15 3.57 103.7 -2.37 -0.56 29.7 77 9 11 5 7 1 1 0   9 1.74 1.96 105.0 -1.36 -0.32 24.9 82 12 12 4 13 5 3 0   10 1.35 1.42 117.3 -2.38 -0.55 31.1 79 11 14 4 9 1 2 0   11 1.34 2.00 118.5 -1.90 -0.55 20.4 82 9 6 6 5 1 3 0  DC 8 G DC 9 G DG 10 G DT 11 G DC 12 H DT 13 H DG 14 H DT 15 H DC 16 H 12 1.71 1.92 125.8 -1.76 -0.39 26.8 80 16 13 5 11 5 2 0   13 1.32 1.37 132.1 -1.97 -0.55 22.8 84 11 9 5 7 1 4 0  DC 8 G DC 9 G DG 10 G DT 11 G DC 12 H DT 13 H DG 14 H DT 15 H DC 16 H 14 1.31 2.12 142.2 -1.21 -0.34 23.4 77 10 13 7 13 1 3 0   15 1.31 2.01 151.9 -1.66 -0.44 26.5 76 14 14 5 11 1 2 0   16 1.90 3.60 158.6 -1.66 -0.46 19.8 76 16 11 5 7 3 10 0  DC 8 G DC 9 G DT 11 G DC 20 G DC 12 H DT 13 H DG 14 H DT 15 H DC 16 H 17 2.04 3.40 160.4 -1.58 -0.45 20.2 78 14 14 5 10 3 11 0  DC 8 G DC 9 G DT 11 G DC 20 G DC 12 H DT 13 H DG 14 H DT 15 H DC 16 H 18 1.17 1.85 208.7 -1.66 -0.48 19.0 78 18 10 14 11 4 12 0  DG 4 G DC 5 G DA 6 G DT 7 G DC 16 H DA 17 H DC 18 H 19 1.27 2.51 229.1 -1.75 -0.55 21.5 80 12 20 14 13 3 10 0  DC 8 G DC 9 G DT 11 G DC 20 G DC 12 H DT 13 H DG 14 H DT 15 H DC 16 H 20 1.47 2.88 232.1 -1.95 -0.52 23.2 79 24 19 13 11 4 12 0  DC 9 G DG 10 G DT 11 G DC 20 G DC 12 H DT 13 H 21 1.26 1.32 266.7 -1.95 -0.54 23.4 79 20 22 17 15 5 9 0  DC 9 G DG 10 G DT 11 G DC 20 G DC 12 H DT 13 H 22 1.23 2.72 270.3 -1.64 -0.37 22.3 81 23 19 16 18 5 12 0  DC 16 H DA 17 H Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.