PDBsum entry 4q2d Go to PDB code:  Pore analysis for: 4q2d calculated with MOLE 2.0 PDB id 4q2d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.66 1.87 40.8 -0.97 -0.48 15.3 92 1 5 3 7 1 0 0  MSE 360 A 2 2.17 2.23 43.2 -1.12 -0.30 22.8 87 3 3 1 4 1 0 0  MSE 486 A 3 1.76 3.02 50.7 -1.38 -0.39 18.9 86 2 7 3 6 3 0 0  MSE 360 A MSE 486 A 4 1.41 1.60 89.9 -0.69 -0.36 9.9 81 4 2 7 5 5 3 1  MSE 338 A MSE 350 A MSE 366 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.