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PDBsum entry 4py1

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protein ligands links
Transferase PDB id
4py1

 

 

 

 

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JSmol PyMol  
Contents
Protein chain
290 a.a.
Ligands
2YK
Waters ×118
PDB id:
4py1
Name: Transferase
Title: Crystal structure of tyk2 in complex with compound 15, 6-((2,5- dimethoxyphenyl)thio)-3-(1-methyl-1h-pyrazol-4-yl)-[1,2,4]triazolo[4, 3-b]pyridazine
Structure: Non-receptor tyrosine-protein kinase tyk2. Chain: a. Engineered: yes. Mutation: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: tyk2. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
2.16Å     R-factor:   0.184     R-free:   0.236
Authors: S.Han,J.D.Knafels
Key ref: P.Galatsis et al. (2014). Kinase domain inhibition of leucine rich repeat kinase 2 (LRRK2) using a [1,2,4]triazolo[4,3-b]pyridazine scaffold. Bioorg Med Chem Lett, 24, 4132-4140. PubMed id: 25113930 DOI: 10.1016/j.bmcl.2014.07.052
Date:
25-Mar-14     Release date:   03-Sep-14    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P29597  (TYK2_HUMAN) -  Non-receptor tyrosine-protein kinase TYK2 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1187 a.a.
290 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 6 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.2.7.10.2  - non-specific protein-tyrosine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H+
L-tyrosyl-[protein]
+ ATP
= O-phospho-L-tyrosyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
DOI no: 10.1016/j.bmcl.2014.07.052 Bioorg Med Chem Lett 24:4132-4140 (2014)
PubMed id: 25113930  
 
 
Kinase domain inhibition of leucine rich repeat kinase 2 (LRRK2) using a [1,2,4]triazolo[4,3-b]pyridazine scaffold.
P.Galatsis, J.L.Henderson, B.L.Kormos, S.Han, R.G.Kurumbail, T.T.Wager, P.R.Verhoest, G.S.Noell, Y.Chen, E.Needle, Z.Berger, S.J.Steyn, C.Houle, W.D.Hirst.
 
  ABSTRACT  
 
Leucine rich repeat kinase 2 (LRRK2) has been genetically linked to Parkinson's disease (PD). The most common mutant, G2019S, increases kinase activity, thus LRRK2 kinase inhibitors are potentially useful in the treatment of PD. We herein disclose the structure, potential ligand-protein binding interactions, and pharmacological profiling of potent and highly selective kinase inhibitors based on a triazolopyridazine chemical scaffold.
 

 

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