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PDBsum entry 4px9

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4px9 calculated with MOLE 2.0 PDB id
4px9
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.66 1.85 28.6 -1.40 -0.40 16.1 77 5 0 2 3 1 0 0  
2 2.40 2.53 33.5 -2.16 -0.75 16.2 84 3 4 4 0 0 1 0  ADP 501 C
3 1.24 1.24 34.9 -2.06 -0.66 31.6 81 2 7 2 3 0 1 0  
4 1.38 1.38 37.1 -2.47 -0.32 31.4 78 4 5 2 3 2 0 0  
5 1.40 1.40 37.7 -1.79 0.09 26.4 78 6 4 1 4 2 0 0  
6 2.39 2.53 38.7 -1.97 -0.60 16.8 84 4 5 3 1 0 1 0  ADP 501 C
7 1.94 2.40 40.2 -2.04 -0.71 15.6 87 5 3 4 1 0 1 0  
8 1.79 2.27 40.9 -2.42 -0.67 26.3 84 6 4 1 1 1 0 0  
9 1.80 2.25 48.7 -2.13 -0.73 19.8 85 5 7 3 1 0 1 0  ADP 501 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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