 |
PDBsum entry 4psx
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 4psx calculated with  MOLE 2.0
|
PDB id
|
|
|
|
4psx
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
7 pores,
coloured by radius |
|
7 pores,
coloured by radius
|
7 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.87 |
2.36 |
29.7 |
-3.22 |
-0.67 |
29.3 |
83 |
|
4 |
6 |
3 |
0 |
0 |
2 |
0 |
|
|
 |
|
2 |
 |
2.07 |
2.93 |
31.1 |
-3.52 |
-0.61 |
44.3 |
79 |
7 |
5 |
0 |
1 |
0 |
1 |
0 |
|
|
3 |
 |
1.32 |
2.11 |
43.8 |
-0.66 |
-0.14 |
15.9 |
79 |
4 |
3 |
2 |
3 |
2 |
1 |
0 |
|
|
4 |
 |
1.26 |
2.08 |
61.0 |
-1.23 |
-0.23 |
19.7 |
81 |
6 |
4 |
4 |
3 |
2 |
1 |
0 |
|
|
5 |
 |
1.95 |
1.94 |
65.1 |
-3.14 |
-0.64 |
38.2 |
81 |
12 |
6 |
2 |
1 |
0 |
2 |
0 |
|
|
6 |
 |
2.75 |
4.14 |
65.5 |
-2.97 |
-0.72 |
32.1 |
83 |
8 |
11 |
6 |
0 |
0 |
2 |
0 |
|
 |
7 |
 |
2.39 |
2.72 |
74.4 |
-2.57 |
-0.61 |
32.4 |
81 |
9 |
10 |
8 |
3 |
2 |
1 |
1 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program