PDBsum entry 4prg

Pore analysis for: 4prg calculated with

MOLE 2.0

PDB id

4prg

Pores calculated on whole structure

Pores calculated excluding ligands

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without HETATM:

4 pores, coloured by radius

6 pores, coloured by radius

6 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.36

2.24

25.1

-0.27

0.15

18.7

80

4

2

2

4

2

0

0

072 3 C

2

1.36

1.36

29.1

-0.18

-0.03

11.4

76

2

3

1

4

3

0

0

072 3 C

3

1.24

1.24

30.8

-0.34

-0.03

10.0

77

2

1

1

5

3

0

0

4

1.21

1.22

43.1

-0.46

-0.13

17.6

72

4

4

1

6

3

0

0

072 3 C

5

1.37

2.35

46.5

0.28

0.24

11.5

80

3

3

2

8

3

0

0

072 3 C

6

2.73

3.62

64.8

-1.53

-0.56

19.1

78

4

6

5

5

1

3

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.