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PDBsum entry 4pr9

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4pr9 calculated with MOLE 2.0 PDB id
4pr9
Pores calculated on whole structure Pores calculated excluding ligands

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11 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.40 1.74 25.5 -2.88 -0.20 37.1 77 5 1 1 1 2 0 0  PIO 1101 E
2 2.16 2.16 25.8 -2.25 -0.11 33.7 79 10 0 2 1 2 1 0  PIO 1101 B
3 2.08 2.43 25.8 -2.16 0.02 30.5 73 7 1 0 1 1 0 0  PIO 1101 A
4 1.38 2.74 26.3 -1.72 0.15 25.9 80 6 0 1 3 1 0 0  PIO 1101 E
5 1.61 1.65 27.6 -2.68 -0.80 34.0 84 3 5 0 0 0 0 0  
6 2.30 2.32 29.2 -2.41 -0.61 29.3 86 6 1 4 2 0 0 0  PIO 1101 E
7 2.28 2.28 30.7 -1.24 -0.27 21.9 78 6 2 0 4 1 1 0  
8 3.84 5.25 43.6 -2.06 -0.35 30.9 85 11 2 4 5 0 0 0  PIO 1101 B GOL 1101 C
9 2.27 2.38 44.0 -2.27 -0.27 30.0 76 11 1 2 1 2 2 0  PIO 1101 B GOL 1101 C
10 1.38 1.73 46.3 -1.39 -0.12 23.4 77 7 1 1 1 2 1 0  PIO 1101 E GOL 1101 F
11 3.83 5.25 48.1 -2.32 -0.36 32.0 80 12 1 4 2 1 1 0  PIO 1101 B GOL 1101 C
12 2.96 3.05 52.2 -2.02 -0.46 31.0 78 8 5 1 6 2 1 0  
13 2.28 2.28 59.6 -2.27 -0.28 32.3 80 14 1 1 5 1 2 0  PIO 1101 B GOL 1101 C
14 2.96 3.05 61.9 -2.27 -0.49 32.0 79 9 5 0 6 2 2 0  
15 3.83 5.25 63.7 -2.33 -0.37 33.3 82 15 1 3 6 0 1 0  PIO 1101 B GOL 1101 C
16 2.13 2.55 68.3 -2.14 -0.32 31.2 82 14 4 2 7 1 1 0  PIO 1101 A
17 3.27 3.27 71.6 -2.36 -0.43 33.5 84 14 4 3 7 0 1 0  PIO 1101 A GOL 1102 B
18 2.97 3.05 93.6 -2.17 -0.46 31.5 78 12 8 1 8 3 2 0  GOL 1101 C
19 3.30 6.00 98.6 -2.15 -0.42 30.6 80 17 5 7 6 1 2 0  PIO 1101 B GOL 1101 C PIO 1101 E GOL 1101 F

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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