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PDBsum entry 4ppg
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Tunnel analysis for: 4ppg calculated with  MOLE 2.0
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PDB id
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4ppg
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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5 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.20 |
1.44 |
17.7 |
1.84 |
0.46 |
6.5 |
78 |
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2 |
2 |
0 |
5 |
0 |
0 |
0 |
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2 |
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1.20 |
1.44 |
20.5 |
0.20 |
-0.19 |
7.1 |
86 |
1 |
1 |
1 |
5 |
0 |
0 |
0 |
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3 |
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1.20 |
1.44 |
25.6 |
-0.12 |
0.03 |
17.1 |
86 |
1 |
2 |
1 |
6 |
0 |
1 |
0 |
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4 |
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1.67 |
1.67 |
16.3 |
-1.58 |
-0.32 |
20.5 |
74 |
3 |
1 |
0 |
2 |
0 |
2 |
1 |
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5 |
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1.27 |
1.42 |
15.5 |
2.76 |
0.71 |
0.5 |
81 |
0 |
0 |
0 |
9 |
1 |
1 |
0 |
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6 |
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1.35 |
2.21 |
20.5 |
1.02 |
0.15 |
2.4 |
80 |
1 |
0 |
2 |
6 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program