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PDBsum entry 4pp8

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4pp8 calculated with MOLE 2.0 PDB id
4pp8
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.37 2.37 35.1 -1.63 -0.62 7.3 82 1 1 2 1 1 1 0  
2 1.51 2.07 44.4 -2.10 -0.67 21.5 87 5 3 7 2 0 0 0  GOL 201 C
3 1.35 1.63 58.2 -2.35 -0.64 17.3 85 3 3 5 1 1 0 0  
4 1.34 1.62 61.3 -2.08 -0.52 16.5 82 3 3 5 2 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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