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PDBsum entry 4pp1
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Tunnel analysis for: 4pp1 calculated with  MOLE 2.0
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PDB id
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4pp1
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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9 tunnels,
coloured by tunnel radius |
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9 tunnels,
coloured by
tunnel radius
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9 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.24 |
1.47 |
19.5 |
-0.56 |
-0.19 |
6.2 |
93 |
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0 |
1 |
3 |
3 |
1 |
0 |
0 |
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2 |
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1.23 |
1.47 |
21.3 |
0.02 |
-0.10 |
6.7 |
98 |
0 |
1 |
5 |
4 |
1 |
0 |
0 |
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3 |
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1.27 |
1.32 |
23.4 |
0.25 |
-0.19 |
9.5 |
78 |
1 |
2 |
2 |
4 |
2 |
1 |
0 |
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4 |
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1.27 |
1.31 |
24.1 |
0.41 |
-0.10 |
8.5 |
80 |
1 |
0 |
2 |
4 |
2 |
0 |
0 |
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5 |
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1.13 |
2.16 |
28.1 |
0.30 |
-0.20 |
5.0 |
86 |
1 |
0 |
4 |
4 |
2 |
0 |
0 |
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6 |
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1.34 |
1.42 |
21.5 |
-0.36 |
-0.51 |
5.1 |
93 |
1 |
0 |
5 |
2 |
1 |
0 |
0 |
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7 |
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1.18 |
2.45 |
24.6 |
0.14 |
-0.25 |
5.2 |
89 |
1 |
0 |
4 |
4 |
1 |
0 |
0 |
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8 |
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1.92 |
2.28 |
17.6 |
-0.57 |
-0.20 |
5.7 |
83 |
1 |
0 |
1 |
3 |
1 |
0 |
0 |
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9 |
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1.32 |
1.48 |
17.8 |
0.58 |
0.25 |
2.1 |
75 |
0 |
0 |
1 |
3 |
2 |
0 |
1 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program