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PDBsum entry 4peq

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 4peq calculated with MOLE 2.0 PDB id
4peq
Pores calculated on whole structure Pores calculated excluding ligands

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13 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.09 1.31 36.8 -1.25 -0.35 21.1 85 6 4 4 3 2 0 0  
2 1.74 3.18 40.0 -1.02 -0.46 16.6 85 3 5 6 7 0 0 1  
3 1.09 1.31 44.0 -2.03 -0.42 27.8 85 10 4 5 3 2 0 0  
4 2.65 3.03 57.2 -2.15 -0.73 25.0 88 8 9 7 4 0 0 1  
5 1.61 3.14 75.0 -2.04 -0.58 16.7 88 3 6 9 3 2 1 0  
6 2.09 4.17 80.7 -2.43 -0.73 27.8 87 4 9 6 3 2 1 0  
7 1.45 1.75 83.1 -2.27 -0.59 32.3 81 10 11 3 4 1 1 0  
8 1.61 1.80 88.2 -2.19 -0.29 26.4 74 13 8 4 3 4 1 0  
9 1.62 1.79 99.2 -2.37 -0.47 24.1 81 13 9 10 3 3 1 1  
10 2.04 2.14 101.2 -1.98 -0.67 21.5 89 6 11 10 5 2 1 1  
11 1.62 1.79 107.5 -2.72 -0.48 30.7 79 16 14 5 1 3 1 0  
12 1.64 2.78 115.9 -2.05 -0.60 25.2 83 7 13 7 5 3 1 0  
13 1.24 1.24 37.8 2.55 0.56 1.6 66 0 1 0 16 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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