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PDBsum entry 4pc3

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Pore analysis for: 4pc3 calculated with MOLE 2.0 PDB id
4pc3
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 29 pores, coloured by radius 29 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.67 4.16 31.1 -1.73 -0.49 23.8 87 3 4 3 3 0 1 0  GDP 401 A
2 2.37 3.99 42.6 -2.21 -0.52 26.5 86 4 4 3 3 1 0 0  
3 1.74 1.97 49.5 -1.40 -0.44 19.4 80 9 2 3 4 2 2 0  GOL 301 D
4 1.85 3.02 50.6 -1.99 -0.51 28.5 85 6 6 4 3 1 1 0  GDP 401 A
5 1.85 2.03 52.2 -1.93 -0.50 26.2 84 7 5 3 4 1 0 0  GOL 301 D
6 1.84 3.02 52.3 -2.24 -0.51 31.4 82 7 4 2 3 1 0 0  
7 1.80 1.98 53.2 -1.78 -0.50 22.1 84 10 4 3 5 1 3 0  
8 1.81 1.99 57.3 -1.59 -0.47 22.2 83 9 5 4 4 1 4 0  GDP 401 A
9 2.74 2.89 58.2 -2.49 -0.57 30.8 82 10 7 3 5 0 2 0  
10 1.80 1.98 61.1 -1.81 -0.50 23.6 82 9 4 3 4 1 3 0  
11 1.72 1.95 64.0 -2.39 -0.57 30.4 82 12 6 4 5 1 1 0  
12 2.55 3.81 65.2 -2.41 -0.71 25.6 89 6 7 5 4 0 0 0  GOL 402 B
13 1.73 1.89 67.9 -2.10 -0.45 25.7 80 11 5 2 2 3 3 0  
14 2.57 4.70 74.0 -1.45 -0.35 25.7 88 7 6 3 7 0 1 0  GDP 401 B
15 2.77 2.87 74.0 -2.49 -0.58 30.1 83 12 9 4 6 0 2 0  
16 1.73 1.88 74.6 -2.11 -0.48 26.7 80 14 4 3 2 4 2 0  
17 2.39 2.97 75.2 -1.37 -0.40 23.4 88 6 7 4 6 0 1 0  GDP 401 B
18 1.78 1.92 80.4 -2.03 -0.53 23.6 82 12 6 4 2 2 3 0  
19 1.76 1.96 80.5 -1.90 -0.46 23.1 83 14 4 3 6 3 3 0  
20 1.31 1.52 81.2 -2.44 -0.63 27.1 85 9 6 4 1 0 2 0  GOL 402 B
21 1.75 1.92 83.7 -2.11 -0.49 25.6 83 13 7 3 3 2 3 0  
22 2.37 3.99 88.5 -2.57 -0.63 31.8 82 10 11 5 4 0 2 0  
23 1.57 1.77 96.6 -1.70 -0.46 26.3 83 11 7 2 7 0 2 0  GDP 401 B
24 2.44 2.97 104.1 -1.66 -0.49 23.8 88 9 9 6 7 0 1 0  GDP 401 B GOL 402 B
25 1.27 1.43 113.4 -2.50 -0.58 30.8 81 16 11 6 3 1 3 0  
26 2.46 2.99 113.9 -1.83 -0.46 24.7 88 12 8 7 7 0 1 0  GDP 401 B
27 1.69 1.89 119.0 -2.22 -0.52 24.3 83 18 7 7 3 3 3 0  
28 1.23 1.36 123.4 -2.51 -0.59 29.9 82 16 14 6 4 0 4 0  
29 1.92 2.14 29.9 -1.45 -0.30 26.4 92 4 2 1 6 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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