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PDBsum entry 4omf
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Tunnel analysis for: 4omf calculated with  MOLE 2.0
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PDB id
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4omf
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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8 tunnels,
coloured by tunnel radius |
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9 tunnels,
coloured by
tunnel radius
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9 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.29 |
2.51 |
35.8 |
-0.23 |
-0.23 |
14.6 |
84 |
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1 |
3 |
2 |
6 |
2 |
0 |
0 |
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UNL 404 B FAD 405 B
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2 |
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1.70 |
1.73 |
39.3 |
0.88 |
0.14 |
4.8 |
83 |
2 |
1 |
3 |
10 |
2 |
0 |
0 |
UNL 404 B FAD 405 B
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3 |
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1.33 |
2.22 |
51.2 |
0.70 |
0.18 |
8.4 |
81 |
3 |
3 |
4 |
11 |
2 |
0 |
4 |
SF4 401 B FAD 405 B
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4 |
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1.31 |
1.36 |
21.8 |
-1.65 |
-0.20 |
16.7 |
82 |
2 |
3 |
2 |
2 |
1 |
2 |
0 |
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5 |
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1.40 |
2.92 |
32.8 |
1.06 |
0.24 |
8.1 |
80 |
1 |
3 |
0 |
8 |
1 |
1 |
1 |
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6 |
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1.17 |
2.61 |
38.9 |
1.16 |
0.43 |
11.1 |
85 |
4 |
3 |
2 |
11 |
1 |
0 |
1 |
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7 |
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1.40 |
2.97 |
40.9 |
2.29 |
0.71 |
4.4 |
84 |
1 |
1 |
0 |
17 |
1 |
0 |
1 |
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8 |
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1.41 |
2.89 |
43.6 |
1.74 |
0.49 |
5.4 |
85 |
1 |
2 |
1 |
17 |
1 |
1 |
0 |
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9 |
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1.10 |
2.00 |
52.7 |
1.45 |
0.48 |
8.5 |
78 |
3 |
2 |
0 |
13 |
1 |
1 |
1 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program