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PDBsum entry 4oin

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Top Page protein dna_rna ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4oin calculated with MOLE 2.0 PDB id
4oin
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.26 2.15 129.6 -1.03 -0.29 16.6 80 13 9 8 13 4 4 0  DG 10 G DT 11 G DA 13 G DG 14 G DT 15 G DC 16 G
DG 17 G DA 10 H DG 11 H DC 12 H 2RA 1 I DSN 2 I
DVA 3 I R2T 4 I 2TL 5 I
2 1.15 2.45 137.4 -0.58 -0.18 15.5 74 11 8 5 18 6 6 0  DG 10 G DT 11 G DG 19 G DA 10 H DG 11 H DC 12 H
3 1.15 2.45 144.5 -0.75 -0.25 15.1 75 7 11 8 16 8 8 0  DG 10 G DT 11 G DG 19 G DA 10 H DG 11 H DC 12 H

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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