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PDBsum entry 4ogx

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 4ogx calculated with MOLE 2.0 PDB id
4ogx
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.11 1.11 35.1 -0.60 -0.19 15.1 76 4 1 2 2 4 0 0  
2 1.35 1.65 40.9 -0.58 -0.33 11.3 75 3 1 3 3 3 1 0  
3 1.36 1.56 41.7 -0.53 -0.30 11.3 75 3 1 3 3 3 1 0  
4 1.22 1.28 20.1 -0.11 0.56 10.0 65 1 1 0 3 4 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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