PDBsum entry 4ofw

Pore analysis for: 4ofw calculated with

MOLE 2.0

PDB id

4ofw

Pores calculated on whole structure

Pores calculated excluding ligands

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19 pores, coloured by radius

19 pores, coloured by radius

19 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.34

2.16

31.8

-1.30

0.11

20.8

78

4

2

3

3

4

1

1

2

1.32

1.48

38.3

-0.89

0.19

17.8

73

3

3

2

6

4

1

1

3

1.33

1.41

41.3

-1.24

-0.07

16.6

78

4

2

3

6

4

2

1

4

1.27

1.33

47.0

-1.18

-0.10

14.9

79

4

3

3

5

4

2

1

5

1.19

1.92

58.4

-1.62

-0.19

20.2

79

4

4

4

2

4

2

1

6

1.14

1.35

72.7

-0.53

-0.02

16.2

76

6

4

3

9

4

1

1

7

1.32

1.73

76.2

-1.14

-0.06

21.6

71

5

5

2

4

4

1

4

8

1.32

1.74

82.1

-1.44

0.07

23.9

69

8

6

0

1

8

2

5

9

1.21

1.36

84.8

-0.50

0.10

12.2

75

5

3

3

5

6

2

4

10

1.25

1.40

87.5

-0.58

0.41

16.9

68

8

3

0

2

10

2

5

11

1.18

1.34

87.1

-0.93

-0.04

15.1

78

6

3

3

6

4

2

3

12

1.33

1.76

107.2

-1.47

-0.29

22.2

77

8

9

5

5

5

2

1

13

1.25

1.50

41.6

-0.82

-0.02

19.1

73

5

2

2

7

4

1

1

14

1.29

1.94

41.9

-1.50

0.29

22.3

68

7

3

0

1

8

2

2

15

1.22

1.59

51.3

-0.26

-0.18

8.7

77

2

2

3

11

1

1

0

16

1.29

1.98

61.9

-1.39

-0.21

18.0

73

5

4

3

8

5

2

1

17

1.32

1.54

45.3

-1.22

-0.06

15.1

81

4

2

3

8

4

1

1

18

1.25

1.81

47.6

-1.21

0.03

13.7

79

3

3

3

5

4

2

1

19

1.27

1.77

50.8

-1.05

0.51

16.6

70

6

2

0

3

8

1

2

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.