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PDBsum entry 4ofi

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Pore analysis for: 4ofi calculated with MOLE 2.0 PDB id
4ofi
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.58 1.95 30.9 -1.99 -0.57 29.0 83 3 6 1 2 0 0 0  
2 2.98 3.20 34.5 -2.72 -0.74 29.6 82 5 5 4 1 1 1 0  
3 2.97 3.24 35.3 -2.64 -0.66 29.0 76 4 5 3 0 2 1 0  
4 2.73 2.73 36.4 -2.15 -0.78 20.9 78 4 5 2 1 1 2 0  
5 2.73 2.73 40.0 -2.47 -0.69 26.8 80 6 5 4 1 1 1 0  
6 2.74 2.74 44.2 -2.78 -0.72 31.6 84 7 6 4 2 0 1 0  
7 1.58 1.95 44.3 -1.99 -0.45 28.6 84 5 6 2 2 1 0 0  
8 3.29 5.07 45.4 -2.69 -0.60 33.9 84 7 6 4 1 1 0 0  
9 1.59 1.95 58.8 -1.62 -0.25 29.5 77 8 8 2 2 4 0 0  
10 1.88 3.19 70.4 -1.58 -0.18 29.7 76 8 8 2 1 5 0 0  
11 1.55 4.77 28.8 -2.39 -0.41 31.3 78 4 5 1 1 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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