spacer
spacer

PDBsum entry 4oeo

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 4oeo calculated with MOLE 2.0 PDB id
4oeo
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 1.20 21.4 -1.13 -0.60 15.9 97 1 2 4 4 0 0 0  12P 203 B
2 1.21 1.21 21.6 -1.19 -0.76 14.5 98 1 2 2 2 0 0 0  12P 203 B
3 1.21 1.21 23.2 -1.79 -0.68 23.8 95 2 3 4 3 0 0 0  12P 203 B
4 1.20 1.20 36.9 -1.07 -0.56 16.0 92 3 4 3 4 1 0 0  12P 203 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer