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PDBsum entry 4oe8

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Top Page protein ligands metals Protein-protein interface(s) links
Immune system PDB id
4oe8
Contents
Protein chains
302 a.a.
154 a.a.
87 a.a.
Ligands
NAG-NAG-BMA-MAN-
MAN
PG4 ×3
Metals
_NA ×2
Waters ×410

References listed in PDB file
Key reference
Title Structural basis of il-23 antagonism by an alphabody protein scaffold.
Authors J.Desmet, K.Verstraete, Y.Bloch, E.Lorent, Y.Wen, B.Devreese, K.Vandenbroucke, S.Loverix, T.Hettmann, S.Deroo, K.Somers, P.Henderikx, I.Lasters, S.N.Savvides.
Ref. Nat Commun, 2014, 5, 5237. [DOI no: 10.1038/ncomms6237]
PubMed id 25354530
Note: In the PDB file this reference is annotated as "TO BE PUBLISHED". The citation details given above have been manually determined.
Abstract
Protein scaffolds can provide a promising alternative to antibodies for various biomedical and biotechnological applications, including therapeutics. Here we describe the design and development of the Alphabody, a protein scaffold featuring a single-chain antiparallel triple-helix coiled-coil fold. We report affinity-matured Alphabodies with favourable physicochemical properties that can specifically neutralize human interleukin (IL)-23, a pivotal therapeutic target in autoimmune inflammatory diseases such as psoriasis and multiple sclerosis. The crystal structure of human IL-23 in complex with an affinity-matured Alphabody reveals how the variable interhelical groove of the scaffold uniquely targets a large epitope on the p19 subunit of IL-23 to harness fully the hydrophobic and hydrogen-bonding potential of tryptophan and tyrosine residues contributed by p19 and the Alphabody, respectively. Thus, Alphabodies are suitable for targeting protein-protein interfaces of therapeutic importance and can be tailored to interrogate desired design and binding-mode principles via efficient selection and affinity-maturation strategies.
PROCHECK
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