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PDBsum entry 4o3m
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Pore analysis for: 4o3m calculated with  MOLE 2.0
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PDB id
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4o3m
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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8 pores,
coloured by radius |
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8 pores,
coloured by radius
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8 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.85 |
2.24 |
27.4 |
-1.53 |
-0.52 |
19.2 |
78 |
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5 |
3 |
2 |
1 |
0 |
1 |
0 |
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DG 5 T DA 6 T
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2 |
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1.84 |
2.24 |
28.1 |
-2.60 |
-0.72 |
32.8 |
92 |
3 |
3 |
3 |
0 |
0 |
0 |
0 |
DC 3 P DG 4 P DT 5 P DC 6 P DG 7 P DA 6 T DT 7 T
DT 9 T DC 10 T
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3 |
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2.87 |
2.87 |
29.3 |
-1.96 |
-0.72 |
22.6 |
82 |
3 |
2 |
2 |
0 |
1 |
1 |
0 |
DC 3 P DG 4 P DT 5 P DC 6 P DG 7 P DT 9 T DC 10 T
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4 |
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2.33 |
3.40 |
29.4 |
-1.97 |
-0.52 |
24.2 |
84 |
6 |
4 |
4 |
4 |
0 |
0 |
0 |
CA 1301 A ADP 1303 A DC 19 T
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5 |
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1.33 |
2.43 |
38.5 |
-0.40 |
0.09 |
11.5 |
78 |
4 |
2 |
3 |
6 |
5 |
1 |
0 |
DC 19 T
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6 |
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2.10 |
4.98 |
42.1 |
-1.20 |
0.11 |
26.5 |
72 |
6 |
4 |
0 |
3 |
3 |
1 |
0 |
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7 |
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1.45 |
1.46 |
42.3 |
-1.53 |
-0.50 |
14.9 |
84 |
3 |
1 |
2 |
4 |
1 |
2 |
0 |
DT 5 P DC 6 P DG 7 P DA 8 P DG 9 P DG 5 T DA 6 T
DC 13 T DG 14 T DC 15 T
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8 |
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1.44 |
1.45 |
46.1 |
-1.50 |
-0.43 |
15.2 |
80 |
4 |
1 |
2 |
3 |
3 |
2 |
0 |
DT 5 P DC 6 P DA 8 P DC 13 T DG 14 T DC 15 T
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program