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PDBsum entry 4o2a

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Pore analysis for: 4o2a calculated with MOLE 2.0 PDB id
4o2a
Pores calculated on whole structure Pores calculated excluding ligands

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14 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.45 1.45 29.2 -1.55 -0.57 18.2 91 1 2 4 3 0 0 0  
2 2.40 2.45 29.9 -2.83 -0.76 31.1 88 3 6 3 0 0 0 0  
3 2.30 2.35 31.0 -0.21 -0.25 3.6 84 0 2 3 3 1 2 0  
4 2.23 2.23 46.1 -1.21 -0.43 14.8 85 3 5 5 5 1 1 0  MG 506 B
5 2.40 2.44 49.4 -2.55 -0.57 30.0 82 4 10 5 0 2 1 0  
6 2.23 2.24 53.7 -1.70 -0.38 21.2 78 4 8 5 3 3 2 0  MG 506 B
7 1.33 2.45 64.4 -0.82 -0.53 10.7 87 2 3 6 4 1 0 1  
8 1.65 1.81 68.7 -2.51 -0.27 34.5 81 14 10 0 5 2 1 0  
9 1.25 1.49 114.3 -1.52 -0.49 20.1 88 6 12 6 4 0 3 0  
10 1.94 1.93 131.6 -2.04 -0.55 21.3 84 14 8 12 4 1 4 0  
11 1.39 1.48 147.8 -1.37 -0.42 15.1 86 7 7 13 10 2 6 0  
12 1.29 1.46 207.4 -1.79 -0.51 22.0 85 16 15 14 9 0 6 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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