PDBsum entry 4nxj Go to PDB code:  Tunnel analysis for: 4nxj calculated with MOLE 2.0 PDB id 4nxj Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.53 1.53 16.2 0.23 0.29 3.6 73 0 1 1 2 3 2 1   2 1.49 1.69 20.1 0.86 0.44 2.2 76 1 0 2 5 4 0 1   3 1.70 1.70 17.4 0.33 0.27 2.6 71 1 0 2 3 4 0 1   4 1.80 1.86 18.0 -0.46 0.36 2.6 80 0 1 1 2 3 0 0   5 1.97 2.16 18.5 0.80 0.45 2.4 74 1 0 2 4 4 0 1   6 1.99 2.17 20.3 0.65 0.63 2.0 78 0 1 1 4 4 0 1   7 1.51 1.76 15.3 0.00 0.16 4.3 72 0 1 0 2 2 2 1   8 1.53 1.79 15.4 0.51 0.36 1.7 64 0 0 0 3 2 2 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.