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PDBsum entry 4ntx

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Transport protein/toxin PDB id
4ntx
Contents
Protein chains
410 a.a.
60 a.a.
118 a.a.
Ligands
NAG ×2
P6G
AMR ×3
Metals
_NA ×3
_CL
Waters ×180

References listed in PDB file
Key reference
Title X-Ray structure of acid-Sensing ion channel 1-Snake toxin complex reveals open state of a na(+)-Selective channel.
Authors I.Baconguis, C.J.Bohlen, A.Goehring, D.Julius, E.Gouaux.
Ref. Cell, 2014, 156, 717-729. [DOI no: 10.1016/j.cell.2014.01.011]
PubMed id 24507937
Abstract
Acid-sensing ion channels (ASICs) detect extracellular protons produced during inflammation or ischemic injury and belong to the superfamily of degenerin/epithelial sodium channels. Here, we determine the cocrystal structure of chicken ASIC1a with MitTx, a pain-inducing toxin from the Texas coral snake, to define the structure of the open state of ASIC1a. In the MitTx-bound open state and in the previously determined low-pH desensitized state, TM2 is a discontinuous α helix in which the Gly-Ala-Ser selectivity filter adopts an extended, belt-like conformation, swapping the cytoplasmic one-third of TM2 with an adjacent subunit. Gly 443 residues of the selectivity filter provide a ring of three carbonyl oxygen atoms with a radius of ∼3.6 Å, presenting an energetic barrier for hydrated ions. The ASIC1a-MitTx complex illuminates the mechanism of MitTx action, defines the structure of the selectivity filter of voltage-independent, sodium-selective ion channels, and captures the open state of an ASIC.
PROCHECK
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 Headers

 

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