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PDBsum entry 4nfs

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4nfs calculated with MOLE 2.0 PDB id
4nfs
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.16 1.40 29.4 0.95 0.09 5.0 89 0 1 3 10 1 0 0  NAJ 377 A ETF 378 A
2 1.16 1.40 34.9 0.03 -0.22 10.2 90 2 1 2 8 1 0 2  NAJ 377 A ETF 378 A
3 1.16 1.40 37.0 -0.14 -0.33 8.8 87 1 1 3 7 1 1 0  NAJ 377 A ETF 378 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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