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PDBsum entry 4ndh
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Tunnel analysis for: 4ndh calculated with  MOLE 2.0
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PDB id
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4ndh
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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0 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.32 |
1.51 |
28.2 |
-0.84 |
0.07 |
19.1 |
79 |
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6 |
0 |
2 |
3 |
3 |
1 |
0 |
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AMP 401 A DG 1 D
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2 |
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1.32 |
1.50 |
31.6 |
-0.50 |
0.14 |
19.1 |
79 |
5 |
2 |
2 |
5 |
3 |
0 |
0 |
AMP 401 A DG 1 D
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3 |
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1.34 |
1.52 |
49.6 |
-0.66 |
0.00 |
17.5 |
79 |
7 |
0 |
2 |
6 |
3 |
1 |
0 |
AMP 401 A DG 1 D
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4 |
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1.26 |
1.53 |
60.5 |
-0.96 |
-0.09 |
18.8 |
76 |
10 |
2 |
3 |
8 |
5 |
1 |
0 |
AMP 401 A DG 1 D
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5 |
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1.26 |
1.53 |
65.7 |
-0.92 |
-0.11 |
16.8 |
72 |
8 |
3 |
3 |
7 |
6 |
1 |
0 |
AMP 401 A DG 1 D
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6 |
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1.07 |
2.67 |
33.1 |
0.63 |
0.45 |
11.5 |
86 |
3 |
0 |
4 |
10 |
1 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program