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PDBsum entry 4n9f

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Top Page protein metals Protein-protein interface(s) pores links
Pore analysis for: 4n9f calculated with MOLE 2.0 PDB id
4n9f
Pores calculated on whole structure Pores calculated excluding ligands

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25 pores, coloured by radius 24 pores, coloured by radius 24 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.50 3.60 83.7 -3.04 -0.71 29.6 84 14 8 8 2 0 1 0  
2 1.31 2.32 90.4 -2.05 -0.45 28.4 83 11 9 4 5 0 1 0  
3 3.24 3.33 111.1 -2.10 -0.50 26.3 82 8 10 9 7 1 3 0  
4 1.24 2.32 125.3 -0.90 -0.26 15.3 86 10 6 6 7 4 0 0  
5 2.59 3.01 129.3 -2.52 -0.65 26.3 82 9 11 10 5 1 2 0  
6 1.82 3.31 132.8 -2.30 -0.49 29.2 85 16 13 10 7 0 1 0  
7 2.24 2.22 140.6 -2.11 -0.41 28.0 80 20 9 4 4 2 0 0  
8 1.49 1.72 174.7 -1.74 -0.42 23.2 85 17 14 9 15 1 1 0  
9 1.30 2.30 195.8 -1.79 -0.35 26.0 80 19 11 10 15 0 3 0  
10 2.80 4.85 205.4 -2.14 -0.40 29.3 80 21 12 9 12 0 2 0  
11 1.38 2.35 246.6 -1.99 -0.50 23.6 87 21 15 20 11 1 1 0  
12 1.62 2.90 261.6 -2.34 -0.63 28.8 83 25 22 14 10 0 2 0  
13 1.38 3.02 268.2 -1.72 -0.40 22.7 83 24 16 20 18 1 2 1  
14 1.19 1.64 274.7 -1.39 -0.44 17.9 85 17 12 20 16 4 2 1  
15 2.14 3.51 269.5 -2.13 -0.39 25.0 82 35 15 16 12 4 4 0  
16 1.24 1.40 287.3 -1.74 -0.41 23.4 82 30 21 13 12 5 5 1  
17 1.19 2.72 336.5 -1.51 -0.32 21.0 85 34 18 19 18 5 2 0  
18 1.49 2.95 345.0 -2.17 -0.55 28.1 83 34 30 17 15 1 3 0  
19 2.35 2.55 334.1 -2.24 -0.46 28.2 83 37 21 14 11 2 2 0  
20 1.74 1.79 341.1 -2.07 -0.41 26.9 82 37 24 16 13 3 4 0  
21 1.26 2.18 366.6 -2.12 -0.56 25.2 82 30 21 23 17 3 4 2  
22 2.24 2.24 360.1 -2.31 -0.49 28.6 83 39 27 17 11 3 3 0  
23 1.79 1.91 405.3 -1.96 -0.40 26.2 83 42 30 18 18 3 5 0  
24 1.43 2.51 401.3 -1.71 -0.39 23.5 84 36 27 25 27 2 3 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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