 |
PDBsum entry 4n90
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 4n90 calculated with MOLE 2.0
|
PDB id
|
|
|
|
4n90
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
14 pores,
coloured by radius |
 |
14 pores,
coloured by radius
|
14 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.21 |
1.89 |
27.0 |
-1.52 |
-0.33 |
25.0 |
81 |
 |
2 |
2 |
2 |
3 |
1 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.78 |
1.98 |
41.6 |
-1.07 |
-0.20 |
8.0 |
74 |
2 |
3 |
4 |
0 |
5 |
3 |
1 |
|
 |
3 |
 |
1.91 |
2.13 |
41.8 |
-1.66 |
-0.53 |
16.1 |
83 |
6 |
2 |
6 |
2 |
3 |
1 |
0 |
|
 |
4 |
 |
1.89 |
2.13 |
43.4 |
-1.87 |
-0.71 |
13.8 |
88 |
3 |
4 |
8 |
1 |
2 |
1 |
0 |
|
 |
5 |
 |
2.45 |
2.98 |
53.9 |
-2.24 |
-0.62 |
23.6 |
86 |
4 |
6 |
4 |
1 |
1 |
1 |
0 |
|
 |
6 |
 |
1.24 |
1.29 |
55.9 |
-1.02 |
-0.16 |
21.9 |
76 |
10 |
5 |
3 |
7 |
2 |
0 |
1 |
|
 |
7 |
 |
1.12 |
1.33 |
67.5 |
-1.44 |
-0.50 |
19.9 |
74 |
6 |
8 |
2 |
3 |
4 |
1 |
1 |
|
 |
8 |
 |
1.12 |
1.30 |
91.3 |
-1.77 |
-0.60 |
22.9 |
80 |
7 |
10 |
4 |
3 |
2 |
1 |
1 |
|
 |
9 |
 |
1.13 |
1.30 |
98.4 |
-1.88 |
-0.64 |
25.0 |
82 |
8 |
12 |
4 |
4 |
2 |
1 |
1 |
|
 |
10 |
 |
1.72 |
1.82 |
107.8 |
-2.26 |
-0.58 |
30.6 |
84 |
12 |
11 |
1 |
3 |
0 |
2 |
0 |
|
 |
11 |
 |
2.89 |
3.06 |
25.7 |
-1.20 |
-0.77 |
8.2 |
89 |
1 |
2 |
3 |
1 |
0 |
1 |
0 |
|
 |
12 |
 |
3.64 |
3.65 |
40.0 |
-1.11 |
-0.75 |
8.0 |
89 |
2 |
2 |
3 |
2 |
0 |
1 |
0 |
|
 |
13 |
 |
2.48 |
2.48 |
41.1 |
-1.03 |
-0.80 |
6.2 |
91 |
0 |
3 |
3 |
2 |
0 |
1 |
0 |
|
 |
14 |
 |
2.59 |
2.64 |
43.1 |
-1.02 |
-0.65 |
6.6 |
83 |
1 |
2 |
1 |
1 |
0 |
4 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |