 |
PDBsum entry 4n07
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 4n07 calculated with MOLE 2.0
|
PDB id
|
|
|
|
4n07
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
4 pores,
coloured by radius |
 |
7 pores,
coloured by radius
|
7 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.88 |
3.60 |
26.3 |
-2.86 |
-0.61 |
34.4 |
83 |
 |
6 |
4 |
2 |
1 |
1 |
0 |
0 |
 |
|
 |
 |
2 |
 |
3.32 |
3.57 |
30.3 |
-2.95 |
-0.62 |
36.4 |
83 |
8 |
4 |
2 |
0 |
1 |
0 |
0 |
ACT 305 A CAC 313 A
|
 |
3 |
 |
1.45 |
1.47 |
33.8 |
-1.81 |
-0.52 |
27.3 |
85 |
5 |
4 |
2 |
3 |
2 |
0 |
0 |
|
 |
4 |
 |
2.38 |
4.57 |
35.4 |
-2.02 |
-0.39 |
31.8 |
77 |
6 |
5 |
0 |
4 |
0 |
1 |
0 |
ACT 303 A
|
 |
5 |
 |
2.25 |
3.12 |
48.6 |
-3.16 |
-0.56 |
39.6 |
80 |
13 |
7 |
2 |
1 |
1 |
1 |
0 |
ACT 303 A ACT 305 A CAC 313 A
|
 |
6 |
 |
1.23 |
1.29 |
76.6 |
-1.25 |
-0.23 |
22.2 |
85 |
10 |
6 |
3 |
7 |
2 |
0 |
0 |
ACT 305 A CAC 313 A
|
 |
7 |
 |
1.43 |
1.44 |
78.7 |
-1.61 |
-0.57 |
18.8 |
86 |
7 |
8 |
10 |
6 |
4 |
0 |
0 |
2J9 301 B GOL 308 B ACT 306 C
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |