 |
PDBsum entry 4myh
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 4myh calculated with MOLE 2.0
|
PDB id
|
|
|
|
4myh
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
7 pores,
coloured by radius |
 |
6 pores,
coloured by radius
|
6 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.40 |
3.05 |
27.1 |
1.20 |
0.78 |
12.0 |
71 |
 |
3 |
1 |
0 |
6 |
5 |
0 |
0 |
 |
|
 |
 |
2 |
 |
2.40 |
3.04 |
30.6 |
1.21 |
0.67 |
9.9 |
70 |
2 |
0 |
0 |
6 |
3 |
1 |
0 |
|
 |
3 |
 |
1.23 |
1.61 |
33.1 |
0.83 |
0.10 |
4.0 |
86 |
1 |
0 |
5 |
8 |
3 |
1 |
0 |
GSH 701 B
|
 |
4 |
 |
1.55 |
3.19 |
58.0 |
-2.20 |
-0.44 |
25.7 |
81 |
7 |
4 |
3 |
5 |
2 |
0 |
0 |
|
 |
5 |
 |
1.44 |
3.49 |
86.3 |
-2.19 |
-0.47 |
26.4 |
85 |
8 |
7 |
6 |
3 |
1 |
0 |
0 |
|
 |
6 |
 |
1.16 |
3.48 |
28.7 |
3.50 |
1.25 |
0.8 |
78 |
1 |
0 |
0 |
13 |
2 |
0 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |